Importance of microscopy for cell biologists in general and spermatologists specifically
Part 2: Checklist how to setup your microscope perfectly for microscopy in general and four types of microscopy important in Computer Aided Sperm Analysis.
In the first blog on Microscopy, I suggested that if you are serious about good microscopic images, you need to understand the basic concepts of microscopy such as Numerical Aperture and resolution and the best resolution that can be attained with light microscopy. Also if you do not understand the principles of Critical Illumination and Köhler illumination there is a 99% chance you use your microscope sub-optimally and even observe “artifacts” – meaning objects that are not true or correct.
In this blog I will focus on the main steps to setup your microscope perfectly for attaining ideal optical conditions and best visual images. Secondly, the ideal microscope conditions for the different aspects of CASA.
Setup (See Fig. 1 and 1b):
- Make sure all optical components (condenser, objective and ocular lenses are free of dust and e.g. finger prints (quite common). Use filtered compressed air to blow dust away. If still not clean (finger prints) try and clean with distilled water and if that does not help clean with 95% alcohol and lens paper.
- Put slide on microscope stage and focus sharply on object (brightfield or phase contrast).
- Close field diaphragm (at base of microscope where light is emitted to condenser lens) and turn condenser up or down until you see the edges of the “fish eye-iris diaphragm” of field condenser sharply focused in the field of view.
- Center this bright spot and open the field diaphragm just enough to almost disappear from the field of view.
- Now refocus and start viewing perfect images. You now have Critical and Köhler illumination!
There are many different types of light microscopy but for CASA we typically use:
- Brightfield microscopy: Here the optical elements are very basic and stained specimens are required such as a sperm smear stained with SpermBlue.
- Positive phase contrast microscopy: Light is projected as a cone of light which is aligned to a phase plate of the same diameter inside the positive phase lens (Fig. 2). For SCA the x10 positive phase objective is used and in the Nikon microscope is marked as 10x, Ph 1. In SCA positive phase contrast is only used for human sperm and the main reason is that sperm are clearly observed as white objects but the granules from e.g. the prostate and most other granules are typical seen as black or grey particles. This is ideal as in 97% of samples sperm will be accurately followed without interference of “background noise – black particles”.
Finally, and of utmost importance: PLEASE CARE ABOUT YOUR MICROSCOPE! KEEP IT CLEAN AND USE IT CORRECTLY. If not do not expect miracles during CASA analysis.
To be continue…
Gerhard van der Horst (PhD, PhD)
Senior Consultant
MICROPTIC S.L.
Thanks for helping me understand the importance of microscopy. I’ve been watching a lot of movies regarding microbiological weapon research and I had no idea that light microscopy has 3 different types. My brother is interested in taking a microbiology degree and this might just help him in some way.
Dear Zachary!
Thanks for your interest in the topic. One of the reasons I wrote this is because of the general poor knowledge of even scientists in labs with degrees. The problem is not the staff but our education system either not recognizing the importance of thorough information and training or simply because they do not think it is important. BUT it is very important.
I have written three blogs on microscopy and there are much more than three microscopic methods (dozens of methods). Check the other two blogs also please and tell you brother about this.
Great he wants to become a microbiologist. They use a lot of darkfield microscopy at 1000 times magnification to classify e.g. bacteria. Viruses are smaller and now with Covid-19 we need more people in this field and there are several advanced methods to study e.g. viruses like Transmission electron microscopy at even 100000 times.
Yes encourage him. Great!
Kindest regards
Gerhard van der Horst